Job Description P0AFV4 Confidence 99.88% Date Thu Jan 5 11:27:22 GMT 2012 Rank 10 Aligned Residues 114 % Identity 28% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	R	I	M	D	Q	Y	A	D	W	K	G	V	R	Y	R	L	G	G	S	T	K	K	G	I	D	C	S	G	F	V	Q	R	T	F	R	E	Q	F	G	L	E	L	P	R	S	T	Y	E	Q	Q	E	M	G	K	S	V	S	R	S	N	L	R	T	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.															.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.															.
Template Sequence		P	G	N	X	A	E	L	G	N	R	X	X	G	Q	P	Y	G	W	G	G	L	Y	E	.	D	R	D	C	S	S	T	L	R	D	L	F	T	P	.	F	G	L	W	L	P	R	N	S	A	S	Q	A	K	A	G	R	Y	V	D	I	A	K	L	D	A	D	D	K	E	A	R	I	V	A	E	G	V	P	F	X
Template Known Secondary structure													T	T		B	B		G	G	G	G	G	G	.		B											G	G	.	G	T					S	S					T	T	S	S						T	T	S															T	T	S
Template Predicted Secondary structure																									.															.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
			134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.												160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure		.																						.	.	.	.						.	.	.	.	.	.	.	.	.	.	.			.	.	.
Query SS confidence		.																						.	.	.	.						.	.	.	.	.	.	.	.	.	.	.			.	.	.
Query Sequence		.	L	V	L	F	R	A	G	S	T	G	R	H	V	G	I	Y	I	G	N	N	Q	.	.	.	.	F	V	H	A	S	.	.	.	.	.	.	.	.	.	.	.	T	S	.	.	.	S	G	V	I	I	S	S	M	N	E	P	Y	W	K	K	R	Y	N	E	A	R	R	V	L	S	R
Query Conservation		.																						.	.	.	.						.	.	.	.	.	.	.	.	.	.	.			.	.	.
Alig confidence		.							.	.	.	.	.											.	.	.	.						.	.	.	.	.	.	.	.	.	.	.			.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		T	L	L	W	L	R	G	.	.	.	.	.	H	I	T	L	Y	L	G	L	H	E	G	Q	A	A	X	F	H	N	X	W	G	I	R	T	H	R	G	G	V	E	G	R	Y	V	L	G	R	A	V	V	T	S	T	R	P	G	L	D	V	P	G	N	D	N	A	D	G	L	L	G	R
Template Known Secondary structure							T	T	.	.	.	.	.										T	T																T	T															S		T	T	T	T	S	T	T	B	S		T	T
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.						.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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