Job Description P0AFV4 Confidence 2.95% Date Thu Jan 5 11:27:22 GMT 2012 Rank 59 Aligned Residues 48 % Identity 13% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		V	S	R	S	N	L	R	T	G	D	L	V	L	F	R	A	G	S	T	G	R	H	V	G	I	Y	I	G	N	N	Q	F	V	H	A	S	T	S	S	G	V	I	I	S	S	M	N	E	.	.	P	Y	W	K	K
Query Conservation																																																		.	.
Alig confidence																																			.	.	.	.	.											.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		F	Y	F	S	R	K	Y	P	G	K	L	T	F	A	Y	N	N	G	S	I	L	E	E	Y	I	G	V	S	D	M	L	T	Y	.	.	.	.	.	N	N	S	T	F	K	D	I	D	S	F	V	A	Y	R	K	R
Template Known Secondary structure						S	S	S	T	T								S	S	S									S	S	S				.	.	.	.	.	T	T				S	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		905	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.						.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions