Job Description P22524 Confidence 9.85% Date Thu Jan 5 11:38:55 GMT 2012 Rank 43 Aligned Residues 59 % Identity 14% Template c2ovqA_ PDB info PDB header:transcription/cell cycle Chain: A: PDB Molecule:s-phase kinase-associated protein 1a; PDBTitle: structure of the skp1-fbw7-cyclinedegc complex Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	M	V	G	K	I	L	C	Y	L	Y	L	S	P	E	R	L	A	N	E	G	I	F	T	Q	Q	E	L	Y	D	E	L	L	T	L	A	D	E	A	K	L	L	K	L	V	N	N	R	S	T	G	S	D	V	D	R	Q	K	L	Q	E	K
Query Conservation
Alig confidence																						.	.	.														.
Template Conservation																						.	.	.														.
Template Sequence		G	T	L	F	E	L	I	L	A	A	N	Y	L	D	I	K	G	L	L	D	.	.	.	V	T	C	K	T	V	A	N	M	I	K	G	K	.	T	P	E	E	I	R	K	T	F	N	I	K	N	D	F	T	E	E	E	E	A	Q	V	R	K	E
Template Known Secondary structure															T							.	.	.								T	T	T	T	T		.
Template Predicted Secondary structure																						.	.	.														.
Template SS confidence
		1098	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.				.	.	1120	.	.	.	.	.	.	.	.	.	1130		.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions