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Job DescriptionP37624
Confidence100.00%DateThu Jan 5 11:55:58 GMT 2012
Rank4Aligned Residues446
% Identity20%Templatec3ozxA_
PDB info PDB header:hydrolase, translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.... .....30.........40.........50.........60.........70.... .....80....
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Query Sequence  AGVSQHYGK. TVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGG. . . . . . . . . . DMRDPKHRRD
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Template Sequence  GEVIHRYKVNGFKLFGLP. TPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKEL
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SSTTS



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TT

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   77..80.........90.... .....100.........110.........120.........130.........140.........150.....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  VCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIH
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Template Sequence  YSNELKIVHK. . . . . . IQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLR
Template Known Secondary structure  TT


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TTGGGTT

SB

SS
TT
GGGTTSBGGG

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   156...160..... ....170.........180.........190.........200.........210.........220.........
 
   165....170.........180.........190.........200.........210.... .....220.........230.........240...
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Query Sequence  DPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAER. FDWLVAMNAGEVLATGSAEELRQQTQSAT
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Template Sequence  EADVYIFDQPSSYLDVRERMNMAKAIRELLK. . . NKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINN
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SSTTTT


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   230.........240.........250.........260 .........270.........280.........290.........300......
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  LEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLT
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Template Sequence  FLKGYL. . . . . . PAENMKIRPDEIKFMLKLKTKMKWTKIIKKLGDFQ. LVVDNGEAKEGEIIGILGPNGIGKTTFARILV
Template Known Secondary structure  T......TTTT
SSS



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TT


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   307..310.. .......320.........330.........340....... ..350.........360.........370.........
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  GLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDI
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Template Sequence  GEITADEGSVTPEKQI. . . . . . . . . . . LSYKPQRIFPNYDGTVQQYLENASKDALSTSSW. . . FFEEVTKRLNLHRLLES
Template Known Secondary structure  TSS

SB

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SSB
SSTT
TTS...TTTTTTGGG
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   390.........400..... ....410.........420.........430........ .440.........450.....
 
   404.....410.........420.........430.........440.........450.........460.........470. ........480..
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Query Sequence  LPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEA. ERCDRISLMHA
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Template Sequence  NVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFK.
Template Known Secondary structure  BGGG

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SSTTTT

TT

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   456...460.........470.........480.........490.........500.........510.........520.........530....
 
   483......490...
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Query Sequence  GKVLASGTPQE
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Template Sequence  GEPEKAGLATS
Template Known Secondary structure  TTT

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   535....540.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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