Job Description P37624 Confidence 100.00% Date Thu Jan 5 11:55:58 GMT 2012 Rank 47 Aligned Residues 298 % Identity 17% Template c3gd7C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) Resolution 2.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		V	P	V	P	P	V	A	Q	L	A	G	V	S	Q	H	Y	.	.	G	K	T	V	A	L	N	N	I	T	L	D	I	P	A	R	C	M	V	G	L	I	G	P	D	G	V	G	K	S	S	L	L	S	L	I	S	G	A	R	V	I	E	Q	G	N	V	M	V	L	G	G	D	M	R	D	P	K	H	R	R	D
Query Conservation																		.	.
Alig confidence																		.	.																																									.
Template Conservation																																																												.
Template Sequence		W	P	S	G	G	Q	M	T	V	K	D	L	T	A	K	Y	T	E	G	G	N	A	I	L	E	N	I	S	F	S	I	S	P	G	Q	R	V	G	L	L	G	R	T	G	S	G	K	S	T	L	L	S	A	F	L	R	L	L	.	N	T	E	G	E	I	Q	I	D	G	V	S	W	D	S	I	T	L	E	Q	W
Template Known Secondary structure					S												S	S	T	T	S													T	T									T	T	S	S									T	T		S	.									T	T			S	S	S	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		1204	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		V	C	P	R	I	A	W	M	P	Q	G	L	G	K	N	L	Y	H	T	L	S	V	Y	E	N	V	D	F	F	A	R	L	F	G	H	D	K	A	E	R	E	V	R	I	N	E	L	.	.	.	.	L	T	S	T	G	L	A	P	F	R	D	R	P	A	G	K	L	S	G	G	M	K	Q	K	L	G	L	C	C
Query Conservation																																																	.	.	.	.
Alig confidence		.												.	.	.																																	.	.	.	.
Template Conservation		.												.	.	.
Template Sequence		.	R	K	A	F	G	V	I	P	Q	K	V	.	.	.	F	I	F	S	G	T	F	R	K	N	L	D	P	N	A	A	H	S	D	Q	E	I	W	K	V	A	D	E	V	G	L	R	S	V	I	E	Q	F	P	G	K	L	D	F	V	L	V	D	G	G	C	V	L	S	H	G	H	K	Q	L	M	C	L	A	R
Template Known Secondary structure		.	G	G	G					S				.	.	.				S	S	B							T	T	S		S										T	T	T	T		T	T	T	G	G	G	S	T	T	G	G	G		B			T	T	T	T	T	S
Template Predicted Secondary structure		.												.	.	.
Template SS confidence
			1283	.	.	.	.	.	.	1290	.	.	.				.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	L	I	H	D	P	E	L	L	I	L	D	E	P	T	T	G	V	D	P	L	S	R	S	Q	F	W	D	L	I	D	S	I	R	Q	R	Q	S	N	M	S	V	L	V	A	T	A	Y	M	E	E	A	.	E	R	F	D	W	L	V	A	M	N	A	G	E	V	L	A	T	G	S	A	E	E	L	R	Q	Q	T
Query Conservation																																																						.
Alig confidence																																				.	.	.	.															.
Template Conservation																																				.	.	.	.
Template Sequence		S	V	L	S	K	A	K	I	L	L	L	D	E	P	S	A	H	L	D	P	V	T	Y	Q	I	I	R	R	T	L	K	Q	A	F	.	.	.	.	A	D	C	T	V	I	L	C	E	A	R	I	E	A	M	L	E	C	D	Q	F	L	V	I	E	E	N	K	V	R	Q	Y	D	S	I	L	E	L	Y	H	Y	P
Template Known Secondary structure					T	T								S					S															T	T	.	.	.	.	T	T	S							S	S	G	G	G	S	T	T		S							S	S						S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		1359	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.					.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	A	T	L	E	E	A	F	I	N	L	L	P	Q	A	Q	R	Q	A	H	Q	A	V	V	I	P	P	Y	Q	P	E	N	A	E	I	A	I	E	A	R	D	L	T	M	R	F	G	S	F	V	A	V	D	H	V	N	F	R	I	P	R	G	E	I	F	G	F	L	G	S	N	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	R	F	V	A	G	F	I	G	S	P	K	M	N	F	L	P	V	K	V	T	A	T	A	I	D	Q	V	Q	V	E	L	P	M	P	N	R	Q	Q	V	W	L	P	V	E	S	R	D	V	Q	V	G	A	N	M	S	L	G	I	R	P	E	H	L	L	P	S	D	I	A	D	V	I
Template Known Secondary structure		S	B					T	T	S	S	S	S														T	T							S	S	T	T							S	B			T	T			T	T									T	T	T				G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		1435	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions