Job Description P37624 Confidence 100.00% Date Thu Jan 5 11:55:58 GMT 2012 Rank 56 Aligned Residues 253 % Identity 22% Template c2pjzA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st1066; PDBTitle: the crystal structure of putative cobalt transport atp-2 binding protein (cbio-2), st1066 Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		V	A	Q	L	A	G	V	S	Q	H	Y	G	K	.	.	.	.	T	V	A	L	N	N	I	T	L	D	I	P	A	R	C	M	V	G	L	I	G	P	D	G	V	G	K	S	S	L	L	S	L	I	S	G	A	R	V	I	E	Q	G	N	V	M	V	L	G	G	D	M	R	D	P	K	H	R	R	D	V	C	P
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.												.																											.																			.	.	.	.	.	.
Template Conservation																														.																											.																			.	.	.	.	.	.
Template Sequence		M	I	Q	L	K	N	V	G	I	T	L	S	G	K	G	Y	E	R	F	S	L	E	N	I	N	L	E	V	.	N	G	E	K	V	I	I	L	G	P	N	G	S	G	K	T	T	L	L	R	A	I	S	G	L	L	.	P	Y	S	G	N	I	F	I	N	G	M	E	V	R	K	I	R	N	.	.	.	.	.	.
Template Known Secondary structure																T	T													.		S	S								T	T	S	S									T	T	S	S	.									T	T			G	G	G		S		.	.	.	.	.	.
Template Predicted Secondary structure																														.																											.																			.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	I	A	W	M	P	Q	G	L	G	K	N	L	Y	H	T	L	S	V	Y	E	N	V	D	F	F	A	R	L	F	G	H	D	K	A	E	R	E	V	R	I	N	E	L	L	T	S	T	G	L	.	A	P	F	R	D	R	P	A	G	K	L	S	G	G	M	K	Q	K	L	G	L	C	C	A	L	I	H	D	P
Query Conservation																																																				.
Alig confidence											.																										.	.	.	.												.
Template Conservation											.																										.	.	.	.
Template Sequence		Y	I	R	Y	S	T	N	L	P	.	E	A	Y	E	I	G	V	T	V	N	D	I	V	Y	L	Y	E	E	L	K	G	L	D	R	D	.	.	.	.	L	F	L	E	M	L	K	A	L	K	L	G	E	E	I	L	R	R	K	L	Y	K	L	S	A	G	Q	S	V	L	V	R	T	S	L	A	L	A	S	Q	P
Template Known Secondary structure			T	T						G	.	G	G	S		T	T	S	B												T						.	.	.	.									T	T			G	G	G	G	G	S	B	G	G	G	S																T
Template Predicted Secondary structure											.																										.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																		.											.
Query SS confidence																																																		.											.
Query Sequence		E	L	L	I	L	D	E	P	T	T	G	V	D	P	L	S	R	S	Q	F	W	D	L	I	D	S	I	R	Q	R	Q	S	N	M	S	V	L	V	A	T	A	Y	M	E	E	A	E	R	.	F	D	W	L	V	A	M	N	A	G	.	E	V	L	A	T	G	S	A	E	E	L	R	Q	Q	T	Q	S	A	T	L
Query Conservation																																																		.											.
Alig confidence																													.	.	.	.	.																	.											.
Template Conservation																													.	.	.	.	.
Template Sequence		E	I	V	G	L	D	E	P	F	E	N	V	D	A	A	R	R	H	V	I	S	R	Y	I	K	E	Y	.	.	.	.	.	G	K	E	G	I	L	V	T	H	E	L	D	M	L	N	L	Y	K	E	Y	K	A	Y	F	L	V	G	N	R	L	Q	G	P	I	S	V	S	E	L	L	E	S	S	I	V	E	G	E
Template Known Secondary structure		S							T	T	T	T																S	.	.	.	.	.		S							S		G	G	G	G	G	G		T	T	S							T	T													T						S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	F	I	N	L	L	P	Q	A	Q	R	Q	A	H	Q	A	V	V	I	P	P	Y	Q	P	E	N	A	E	I	A	I	E	A	R	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	D	A	L	L	V	L	D	I	M	D	K	K	V	S	I	V	K	G	D	L	G	M	K	F	G	A	L	G	S	L	N	R	I	Y	G	I
Template Known Secondary structure			T	T		S						T	T								S	S	S	S			G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions