Return to main results Retrieve Phyre Job Id

Job DescriptionP37624
Confidence100.00%DateThu Jan 5 11:55:58 GMT 2012
Rank16Aligned Residues231
% Identity30%Templatec2olkD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280.........290.........300.........310.........320.........330.........340.... .....350..
Predicted Secondary structure 



































...


Query SS confidence 




































































. . .







Query Sequence  AIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKD. . . IDTRRRVG
Query Conservation                  
  
   
  

   
 
 








  
 
      
 
   
       ...      

Alig confidence 




































































...







Template Conservation   
 
 


  
     
  

  
  


  
 
 









 
 
      
 
 
 
                
 
Template Sequence  MIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVG
Template Known Secondary structure  SSSS

TT

STTSSTTSS

STTTTSTT

Template Predicted Secondary structure 































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   353......360.........370.... .....380.........390.........400.........410.........420.........430.
Predicted Secondary structure 









.


















Query SS confidence 





















.
























































Query Sequence  YMSQAFSLYNELTVRQNLELHA. RLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLIL
Query Conservation     
        

 
 
    .                 
    
          



  


 

  
   
 



Alig confidence 





















.
























































Template Conservation     
   
    

 
 
                      
  
 
          

 
 



 

 

   
 



Template Sequence  MVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLF
Template Known Secondary structure 
SS

S
TTS
TS


TT
GGGTTS
GGGS
TT

S
Template Predicted Secondary structure 




























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   432.......440.........450.........460.........470. ........480.........490.........500.......
Predicted Secondary structure 












.










Query SS confidence 







































.



































Query Sequence  DEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEA. ERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAF
Query Conservation 



 


          
  
      


  

     .   
 
  
  
 
   
   

             
Alig confidence 
























.













.



































Template Conservation 



 


      
   
  
   .
 


  

         
 
  
  
 
   
    
            
Template Sequence  DEPTSALDPEMVGEVLSVMKQLANE. GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFL
Template Known Secondary structure  SSSTTS
T.T

S

STT
S
SS
Template Predicted Secondary structure 







.













Template SS confidence 












































































   161........170.........180..... ....190.........200.........210.........220.........230......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions