Job Description P37624 Confidence 100.00% Date Thu Jan 5 11:55:58 GMT 2012 Rank 41 Aligned Residues 227 % Identity 19% Template c2d2fA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8 Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		P	V	A	Q	L	A	G	V	S	Q	H	Y	G	K	T	V	A	L	N	N	I	T	L	D	I	P	A	R	C	M	V	G	L	I	G	P	D	G	V	G	K	S	S	L	L	S	L	I	S	G	A	R	V	.	.	I	E	Q	G	N	V	M	V	L	G	G	D	M	R	D	P	K	H	R	R	D	V	C	P	R
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		S	Q	L	E	I	R	D	L	W	A	S	I	D	G	E	T	I	L	K	G	V	N	L	V	V	P	K	G	E	V	H	A	L	M	G	P	N	G	A	G	K	S	T	L	G	K	I	L	A	G	D	P	E	Y	T	V	E	R	G	E	I	L	L	D	G	E	N	I	L	E	L	S	P	D	E	R	A	R	K	G
Template Known Secondary structure														T	T													T	T								S	S	S	S	S										T		T	T											T	T				T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																															.	.	.																							.	.
Query SS confidence																															.	.	.																							.	.
Query Sequence		I	A	W	M	P	Q	G	L	G	K	N	L	Y	H	T	L	S	V	Y	E	N	V	D	F	F	A	R	L	F	.	.	.	G	H	D	K	A	E	R	E	V	R	I	N	E	L	L	T	S	T	G	L	A	P	.	.	F	R	D	R	P	A	G	K	L	S	G	G	M	K	Q	K	L	G	L	C	C	A	L	I
Query Conservation																															.	.	.																							.	.
Alig confidence									.	.																					.	.	.																							.	.
Template Conservation									.	.
Template Sequence		L	F	L	A	F	Q	Y	.	.	P	V	E	V	P	G	V	T	I	A	N	F	L	R	L	A	L	Q	A	K	L	G	R	E	V	G	V	A	E	F	W	T	K	V	K	K	A	L	E	L	L	D	W	D	E	S	Y	L	S	R	Y	L	N	E	G	F	S	G	G	E	K	K	R	N	E	I	L	Q	L	L	V
Template Known Secondary structure		B							.	.		T	T			S		B														T	S																			T			G	G	G	G	G	S	B	T	T	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		82	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		H	D	P	E	L	L	I	L	D	E	P	T	T	G	V	D	P	L	S	R	S	Q	F	W	D	L	I	D	S	I	R	Q	R	Q	S	N	M	S	V	L	V	A	T	A	Y	M	E	E	A	E	R	.	.	F	D	W	L	V	A	M	N	A	G	E	V	L	A	T	G	S	A	E	E	L	R	Q	Q	T	Q	S
Query Conservation																																																					.	.
Alig confidence																																			.	.																	.	.
Template Conservation																																			.	.
Template Sequence		L	E	P	T	Y	A	V	L	D	E	T	D	S	G	L	D	I	D	A	L	K	V	V	A	R	G	V	N	A	M	R	G	P	.	.	N	F	G	A	L	V	I	T	H	Y	Q	R	I	L	N	Y	I	Q	P	D	K	V	H	V	M	M	D	G	R	V	V	A	T	G	G	P	E	L	A	L	E	L	E	A	K
Template Known Secondary structure					S							G	G	G	T	T																	B	T	.	.	T	B							S	S	S	G	G	G	G	T	S			S							T	T							S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions