Return to main results Retrieve Phyre Job Id

Job DescriptionP37624
Confidence100.00%DateThu Jan 5 11:55:58 GMT 2012
Rank15Aligned Residues231
% Identity32%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280...... ...290.........300.........310.........320.........330.........340.........350....
Predicted Secondary structure 

.




































Query SS confidence 










.



































































Query Sequence  AIEARDLTMRF. GSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYM
Query Conservation             .     
  
   
  

   
 
 








  
 
      
 
   
             

  
Alig confidence 










.



























































.






Template Conservation 

 
  

  
 
   

  


 
  

   


 








  
 

  
  
 
   
  
      .       
Template Sequence  TIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. KRNVGLV
Template Known Secondary structure 


TTSTT

TT

STTSSTSS

STT
TT

GG.GSS
Template Predicted Secondary structure 
































.


Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80..... ....90..
 
   355....360.........370.........380.........390.........400.........410.........420.........430....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEP
Query Conservation   
        

 
 
                     
    
          



  


 

  
   
 






Alig confidence 















































































Template Conservation            

 


                     
               



  


 




   
 






Template Sequence  FQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEP
Template Known Secondary structure  TT



TTS
TTGGGTT

TT
GGGTTS
GGGS
TT

SST
Template Predicted Secondary structure 




































Template SS confidence 















































































   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   435....440.........450.........460.........470. ........480.........490.........500.......
Predicted Secondary structure 










.










Query SS confidence 




































.



































Query Sequence  TSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEA. ERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAF
Query Conservation 
 


          
  
      


  

     .   
 
  
  
 
   
   

             
Alig confidence 




































.



































Template Conservation   
 

      
   
  
    
 


 



  
    



 

  
 

  
   

   
     
   
Template Sequence  FAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFI
Template Known Secondary structure  TTTS


S

STT
S
SSS
Template Predicted Secondary structure 


















Template SS confidence 









































































   173......180.........190.........200.........210.........220.........230.........240......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions