Return to main results Retrieve Phyre Job Id

Job DescriptionP33647
Confidence2.07%DateThu Jan 5 11:52:30 GMT 2012
Rank85Aligned Residues21
% Identity33%Templated1d7qa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.
Predicted Secondary structure 














Query SS confidence 




















Query Sequence  MVKKSEFERGDIVLVGFDPAS
Query Conservation 
      




  
   
  
Alig confidence 




















Template Conservation   

 


  

 


      
Template Sequence  LRKKVWINTSDIILVGLRDYQ
Template Known Secondary structure  GGGS



TT

SSSS
Template Predicted Secondary structure 








Template SS confidence 




















   78.80.........90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions