Job Description P33647 Confidence 83.54% Date Thu Jan 5 11:52:30 GMT 2012 Rank 6 Aligned Residues 95 % Identity 21% Template c2l89A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:pwwp domain-containing protein 1; PDBTitle: solution structure of pdp1 pwwp domain reveals its unique binding2 sites for methylated h4k20 and dna Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	K	S	E	F	E	R	G	D	I	V	L	V	G	F	D	P	A	S	G	H	E	Q	Q	G	A	G	R	P	A	L	V	L	S	V	Q	A	F	N	Q	L	G	M	T	L	V	A	P	I	T	Q	G	G	N	F	A	R	Y	A	G	F	S	V	P	L	H	C	E	E	G	D	V	H	G	V	V	L	V	N
Query Conservation
Alig confidence																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	D	D	R	L	N	F	G	D	R	I	L	V	K	A	P	.	.	.	.	.	.	.	G	Y	P	W	W	P	A	L	L	L	R	R	K	E	T	K	D	S	L	.	.	.	.	.	.	.	.	.	.	.	N	T	N	S	S	F	N	V	L	Y	K	V	L	F	F	P	D	F	N	F	A	W	V	K	R	N
Template Known Secondary structure				S					T	T								S	.	.	.	.	.	.	.	S	S															S	S	S	.	.	.	.	.	.	.	.	.	.	.		S	S	S											T	T	T	T							G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80												.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	R	M	M	D	L	H	A	R	L	A	K	R	I	G	L	A	A	D	E	V	V	E	E	A	L	L	R	L	Q	A	V	V	E
Query Conservation
Alig confidence								.																.
Template Conservation								.																.
Template Sequence		S	V	K	P	L	L	.	D	S	E	I	A	K	F	L	G	S	S	K	R	K	S	.	K	E	L	I	E	A	Y	E	A	S	K	T
Template Known Secondary structure		G						.											S	S	S			.											T
Template Predicted Secondary structure								.																.
Template SS confidence
		107	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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