Return to main results Retrieve Phyre Job Id

Job DescriptionP33647
Confidence2.78%DateThu Jan 5 11:52:30 GMT 2012
Rank56Aligned Residues37
% Identity5%Templatec2kiwA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:int protein; PDBTitle: solution nmr structure of the domain n-terminal to the2 integrase domain of sh1003 from staphylococcus3 haemolyticus. northeast structural genomics consortium4 target shr105f (64-166).
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110......
Predicted Secondary structure 







Query SS confidence 




































Query Sequence  VNQVRMMDLHARLAKRIGLAADEVVEEALLRLQAVVE
Query Conservation    

 


 
 
    

 
    
  
   
   

Alig confidence 




































Template Conservation 
  

   
           
  
       
  

 
Template Sequence  IQTIKKHDYQRFVDDISAQYSKNYVDSIVASTNMIFK
Template Known Secondary structure  GGG

TTS
Template Predicted Secondary structure 









Template SS confidence 




































   104.....110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions