Return to main results Retrieve Phyre Job Id

Job DescriptionP33647
Confidence2.14%DateThu Jan 5 11:52:30 GMT 2012
Rank78Aligned Residues42
% Identity10%Templatec2bhvC_
PDB info PDB header:bacterial proteinChain: C: PDB Molecule:comb10; PDBTitle: structure of comb10 of the com type iv secretion system of2 helicobacter pylori
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50
Predicted Secondary structure 



























Query SS confidence 











































Query Sequence  FERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLGMTLVAP
Query Conservation   




  
   
  
 
   
 

 



    
     



Alig confidence 





















..



















Template Conservation 
  

 
 
 
 
 






 ..
 
 

 



  
  



Template Sequence  ITADKMIPAFLITPISSQIAGK. . VIAQVESDIFAHMGKAVLIP
Template Known Secondary structure 
TT

SS
SSS
..
S

SSSS

Template Predicted Secondary structure 












..







Template SS confidence 











































   172.......180.........190... ......200.........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions