 |
Job Description | P77162 | Confidence | 3.96% | Date | Thu Jan 5 12:25:48 GMT 2012 |
Rank | 79 | Aligned Residues | 23 |
% Identity | 35% | Template | c3cvzA_ |
PDB info |
PDB header:structural protein | Chain: A: PDB Molecule:s-layer protein; |
PDBTitle: structural insights into the molecular organization of the2 s-layer from clostridium difficile
|
Resolution | 2.40 Å |
|
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | F | D | V | Y | V | N | D | H | K | A | G | T | F | T | A | D | R | K | N | A | E | K | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|
|   |   |
|
|
|
|   |   | . | . |
|
|   |   |   |   |
Template Sequence |   |
G | K | I | T | V | S | F | N | D | G | V | V | G | E | V | A | P | . |
. |
K | S | A | N | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| . | . | S | S | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
. | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|