 |
Job Description | P76065 | Confidence | 3.46% | Date | Thu Jan 5 12:18:05 GMT 2012 |
Rank | 61 | Aligned Residues | 56 |
% Identity | 13% | Template | d1zara1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Rio2 serine protein kinase N-terminal domain
|
Resolution | 1.75 |
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Y | L | A | D | T | M | H | L | S | A | E | E | H | G | A | Y | L | L | L | M | F | N | Y | W | Q | T | G | K | P | I | P | K | N | R | L | A | K | I | A | R | L | T | N | E | R | W | A | D | V | E | P | S | L | Q | E | F |
Query Conservation |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
| . |   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
Template Sequence |   |
N | I | A | E | L | Y | G | K | M | G | K | H | S | W | R | I | M | D | A | I | F | K | N | L | W | D | Y | E | . |
Y | V | P | L | Q | L | I | S | S | H | A | R | I | G | E | E | K | A | R | N | I | L | K | Y | L | S | D | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
| S | . | S |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|