 |
Job Description | P76065 | Confidence | 2.72% | Date | Thu Jan 5 12:18:05 GMT 2012 |
Rank | 99 | Aligned Residues | 58 |
% Identity | 14% | Template | c3iz5U_ |
PDB info |
PDB header:ribosome | Chain: U: PDB Molecule:60s ribosomal protein l21 (l21e); |
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
|
Resolution | 5.50 Å |
|
 |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | H | L | R | I | E | E | D | L | A | S | . |
V | R | E | K | L | T | K | K | S | A | A | G | K | A | S | V | Q | A | R | R | S | R | K | E | A | D | V | Q | T | K | Q | E | R | N | L | T | G | V | Q | T | D | V | E | V | V | F | E |
Query Conservation |   |
  |
|   |
|   |
|   |
|
|   |   | . |   |   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |
|
|
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
|
|
Template Sequence |   |
Q | P | S | R | C | N | E | E | F | L | Q | R | K | L | N | N | D | K | L | K | A | E | A | K | A | R | G | E | V | I | S | T | K | R | Q | P | A | G | P | K | P | G | F | M | V | E | G | T | T | I | E | T | V | T | P | I | P | Y | D |
Template Known Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
| S |
| S | T | T |  |  |  |  | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  | T | T | T | S | S |
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|