 |
Job Description | P38054 | Confidence | 11.40% | Date | Thu Jan 5 11:57:54 GMT 2012 |
Rank | 81 | Aligned Residues | 107 |
% Identity | 8% | Template | d1vkoa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | Y | L | N | Q | V | Q | G | K | L | P | A | G | V | S | A | E | L | G | P | D | A | T | G | V | G | W | I | Y | E | Y | A | L | V | D | R | S | G | K | H | D | L | A | D | L | R | S | L | Q | D | W | F | L | K | Y | E | L | K | T | I | P | D | V | A | E | V | A | S | V | G | G | V | V | K | E | Y | Q | V | V |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |
|
|
|
|
|   |   |
|   |
|
|   |
|   |
|
|   |
|
|   |
|
|
| . |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
Template Sequence |   |
P | E | L | Q | E | K | L | R | P | F | M | E | P | I | V | P | L | P | S | I | Y | Y | P | D | F | I | A | S | N | Q | G | D | R | A | N | N | V | I | P | G | D | N | K | L | E | H | L | E | H | I | R | A | D | I | R | . |
K | F | K | Q | E | H | E | L | E | C | V | I | V | L | W | T | A | N | T | E | R | Y | T | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| B |
| B |
|
|
| G | G | G | S |
| G | G | G | G | G | G |
|
| S | B |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| S |
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | P | Q | R | L | A | Q | Y | G | I | S | L | A | E | V | K | S | A | L | D | A | S | N | Q | E | A | G | G | S | S | I |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
| . | . | . | . |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|
Template Sequence |   |
V | R | Q | G | . |
. |
. |
. |
L | N | A | T | A | D | E | I | M | E | S | I | R | V | N | E | D | E | V | S | P | S | N | I |
Template Known Secondary structure |   |
|
| T | T | . | . | . | . | T | T | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | |
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|