 |
| Job Description | P38054 | | Confidence | 10.39% | Date | Thu Jan 5 11:57:54 GMT 2012 |
| Rank | 88 | Aligned Residues | 104 |
| % Identity | 13% | Template | d1nvmb2 |
| SCOP info | FwdE/GAPDH domain-like
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
| GAPDH-like
|
| Resolution | 1.70 |
|
 |
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | V | T | Y | P | L | T | T | T | M | L | S | V | P | G | A | K | T | V | R | G | F | S | Q | F | G | D | S | Y | V | Y | V | I | F | E | D | G | T | . |
. |
D | P | Y | W | A | R | S | R | V | L | E | Y | L | N | Q | V | Q | G | K | L | P | A | G | V | S | A | E | L | G | P | D | A | T | G | V | G | W | I | Y | E |
| Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |
|   |
|   |   |   |   | . | . |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|   |
| . | . | . | . |
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|
| . | . |   |   |   |
|
|
|
|   |
|
|
|
|   |
|   |   |   |
|
|
| Template Sequence |   |
Q | A | T | I | P | M | V | A | A | V | S | R | V | A | K | V | H | Y | A | E | I | V | A | S | I | S | S | K | S | . |
. |
. |
. |
A | G | P | G | T | R | A | N | I | D | E | F | T | E | T | T | S | K | A | I | E | V | I | G | G | A | . |
. |
A | K | G | K | A | I | I | I | M | N | P | A | E | P | P | L | I | M | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | . | . | . | . | S |
|  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | S | S |  |  |  |  |  |  |  |  |
|
| S | S |
|
|
|  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
|   |
|   |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | A | L | V | D | R | S | G | K | H | D | L | A | D | L | R | S | L | Q | D | W | F | L | K | Y | E | L | K | T | I | P | D |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
| Template Sequence |   |
D | T | V | Y | V | L | S | A | A | A | D | Q | A | A | V | A | A | S | V | A | E | M | V | Q | A | V | Q | A | Y | V | P | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|