Phyre 2 alignment of P38054 with c3c6fD

Job Description P38054
Confidence 13.24% Date Thu Jan 5 11:57:54 GMT 2012

Rank 73 Aligned Residues 67

% Identity 12% Template c3c6fD_

PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:yetf protein; PDBTitle: crystal structure of protein bsu07140 from bacillus subtilis

Resolution 2.50 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence	V	I	D	P	Q	R	L	A	Q	Y	G	I	S	L	A	E	V	K	S	A	L	D	A	S	N	Q	.	.	.	.	.	E	A	G	G	S	S	I	E	L	A	E	A	E	Y	M	V	R	A	S	G	Y	L	Q	T	L	D	D	F	N	H	I	V	L	K	A	S	E	N	G	V	P	V	Y	L
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																														.	.	.
Template Conservation																																																													.	.	.
Template Sequence	E	L	Q	Y	K	V	M	K	K	N	K	I	D	I	N	Q	L	Q	S	M	L	R	Q	A	G	S	F	S	I	Q	E	V	E	Y	A	I	M	E	T	N	G	M	V	S	V	L	P	K	S	D	F	D	K	P	T	N	K	D	M	Q	.	.	.	I	P	S	K	S	V	S	L	P	I	T	L
Template Known Secondary structure										T	T													T	T			S	G	G	G								T	T	S								G	G	G	S				T	T	T	T	T	.	.	.
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
	102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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