 |
Job Description | P38054 | Confidence | 18.56% | Date | Thu Jan 5 11:57:54 GMT 2012 |
Rank | 59 | Aligned Residues | 43 |
% Identity | 26% | Template | c3bqhA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb; |
PDBTitle: structure of the central domain (msra) of neisseria meningitidis pilb2 (oxidized form)
|
Resolution | 1.95 Å |
|
 |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
180 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | F | L | K | Y | E | L | K | T | I | P | D | V | A | E | V | A | S | . |
. |
V | G | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | K | E | Y | Q | V | V | I | D | P | Q | R | L | A | Q | Y | G | I | S | L | A | E | V | K | S | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   | . | . |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |
|   |
|
|
|   |
|   |
|   |
|   |
|
|
|   |   | . | . | . | . | . |
|
|   |   |   |
|
|   |   |
Template Sequence |   |
W | G | L | E | A | Y | F | Q | R | I | D | G | V | V | D | A | V | S | G | Y | A | N | G | N | T | K | N | P | S | Y | E | D | V | S | Y | R | H | T | G | H | A | E | T | V | K | V | T | Y | D | A | D | K | . |
. |
. |
. |
. |
L | S | L | D | D | I | L | Q | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S | T | T |  |  |  |  |  |  |  |  |  | S |
| S | S | S | S |
|
|  |  |  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
|
|
|
|
. | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|