Job Description P38054 Confidence 12.72% Date Thu Jan 5 11:57:54 GMT 2012 Rank 75 Aligned Residues 58 % Identity 17% Template c1vs3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:trna pseudouridine synthase a; PDBTitle: crystal structure of the trna pseudouridine synthase trua from thermus2 thermophilus hb8 Resolution 2.25 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		V	T	Y	P	L	T	T	T	M	L	S	V	P	G	A	K	T	V	R	G	F	S	Q	F	.	.	G	D	S	Y	V	Y	V	I	F	E	D	G	T	D	P	Y	W	A	R	S	R	V	L	E	Y	L	N	Q	V	Q	G	K	L	P	A	G	V
Query Conservation																										.	.
Alig confidence																										.	.																														.	.	.
Template Conservation																																																									.	.	.
Template Sequence		V	Q	G	E	L	E	R	A	L	P	G	I	G	A	L	P	K	A	V	A	A	G	R	T	D	A	G	V	H	A	L	A	M	P	F	H	V	D	V	E	S	A	I	P	V	E	K	V	P	E	A	L	N	R	L	.	.	.	L	P	E	D	L
Template Known Secondary structure										G	G	G	G	T	B		S					S	S				T	T														S				G	G	G									.	.	.	S		T	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions