Return to main results Retrieve Phyre Job Id

Job DescriptionP23305
Confidence31.81%DateThu Jan 5 11:39:21 GMT 2012
Rank69Aligned Residues51
% Identity18%Templated2ff4a1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.......
Predicted Secondary structure 














Query SS confidence 


















































Query Sequence  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV
Query Conservation     
  

   



     

  
  

   




 


   


    
Alig confidence 


















































Template Conservation     

  
    
  

   
   

           
   
 



 
  
Template Sequence  QRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGG
Template Known Secondary structure  TTTSTT


TTGG
Template Predicted Secondary structure 














Template SS confidence 


















































   35....40.........50.........60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions