Job Description P23305 Confidence 98.20% Date Thu Jan 5 11:39:21 GMT 2012 Rank 24 Aligned Residues 133 % Identity 12% Template c3eeaB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:gaf domain/hd domain protein; PDBTitle: the crystal structure of the gaf domain/hd domain protein2 from geobacter sulfurreducens Resolution 1.80 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																	.	.	.	.	.	.	.
Query SS confidence																				.																																	.	.	.	.	.	.	.
Query Sequence		A	A	S	S	L	D	D	M	L	M	R	F	H	R	W	A	R	D	.	L	G	L	A	G	A	S	L	R	L	F	P	D	R	W	R	L	G	A	P	S	N	H	T	H	L	A	L	S	R	Q	S	.	.	.	.	.	.	.	F	E	P	L	R	I	Q	R	L	G	Q	E	Q	H	Y	L	G	P	L	N	G	P
Query Conservation																				.																																	.	.	.	.	.	.	.
Alig confidence																				.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	D	V	D	E	V	I	K	D	L	S	R	L	L	R	K	L	V	K	T	R	W	I	A	V	Y	F	F	D	R	D	F	A	P	A	R	S	T	G	L	P	A	S	F	L	P	V	F	R	E	M	P	L	A	P	D	K	I	P	L	L	K	S	M	L	R	K	R	Q	H	L	M	L	T	D	P	G	S
Template Known Secondary structure			S																		S			S																		S			G	G	G									B		T	T	T											T						S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure										.	.													.
Query SS confidence										.	.													.
Query Sequence		E	L	L	V	V	L	P	E	.	.	A	K	A	V	G	S	V	A	M	S	M	L	.	G	S	D	A	D	L	G	V	V	L	F	T	S	R	D	A	S	H	Y	Q	Q	G	Q	G	T	Q	L	L	H	E	I	A	L	M	L	P	E	L	L	E	R
Query Conservation										.	.													.
Alig confidence										.	.													.
Template Conservation
Template Sequence		S	D	L	L	T	P	K	L	R	K	L	L	R	N	L	C	V	L	A	V	P	M	V	V	R	T	Q	V	I	G	A	V	F	M	A	R	T	R	D	N	P	P	F	S	D	A	E	T	A	I	I	R	D	L	V	S	H	A	A	L	V	V	S	H
Template Known Secondary structure			T	T	S								T	T	T											T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions