Job Description P23305 Confidence 97.88% Date Thu Jan 5 11:39:21 GMT 2012 Rank 32 Aligned Residues 143 % Identity 8% Template c3dbaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c Resolution 2.57 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		87	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	L	L	Y	L	Q	R	S	L	T	A	A	S	.	S	L	D	D	M	L	M	R	F	H	R	W	A	R	D	.	L	G	L	A	G	A	S	L	R	L	F	P	D	R	W	R	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	N	H	T	H	L	A	L	S	R	Q	S	F
Query Conservation																.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	L	F	E	L	L	T	E	I	Q	D	E	A	G	S	M	E	K	I	V	H	K	T	L	Q	R	L	S	Q	L	L	A	A	D	R	C	S	M	F	I	C	R	S	R	N	G	I	P	E	V	A	T	R	L	L	N	V	T	P	T	S	K	F	E	D	N	L	V	N	P	D	K	E	T	V	F	P	L	D
Template Known Secondary structure											S		S		T	T		T																T												S	S	S	S												T	T							B			G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																												.	.	.	.																.
Query SS confidence																												.	.	.	.																.
Query Sequence		E	P	L	R	I	Q	R	L	G	Q	E	Q	H	Y	L	G	P	L	N	G	P	E	L	L	V	V	.	.	.	.	L	P	E	A	K	A	V	G	S	V	A	M	S	M	L	.	G	S	D	A	D	L	G	V	V	L	F	T	S	R	D	A	S	H	Y	Q	Q	G	Q	G	T	Q	L	L	H	E	I	A	L	M
Query Conservation																												.	.	.	.																.
Alig confidence																												.	.	.	.																.
Template Conservation
Template Sequence		I	G	I	A	G	W	V	A	H	T	K	K	F	F	N	I	P	D	V	K	K	N	N	H	F	S	D	Y	L	D	K	K	T	G	Y	T	T	V	N	M	M	A	I	P	I	T	Q	G	K	E	V	L	A	V	V	M	A	L	N	K	L	N	A	S	E	F	S	K	E	D	E	E	V	F	K	K	Y	L	N	F
Template Known Secondary structure		S	S									T						S	S	T	T	S	S	T	T																								T	T												S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	L	V	L	R
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions