Job Description P23305 Confidence 97.97% Date Thu Jan 5 11:39:21 GMT 2012 Rank 30 Aligned Residues 122 % Identity 12% Template c2vjwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:gaf family protein; PDBTitle: crystal structure of the second gaf domain of devs from2 mycobacterium smegmatis Resolution 2.0 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																	.																																	.	.	.	.	.	.
Query SS confidence																	.																																	.	.	.	.	.	.
Query Sequence		S	L	D	D	M	L	M	R	F	H	R	W	A	R	D	.	L	G	L	A	G	A	S	L	R	L	F	P	D	R	W	R	L	G	A	P	S	N	H	T	H	L	A	L	S	R	Q	S	.	.	.	.	.	.	F	E	P	L	R	I	Q	R	L	G	Q	E	Q	H	Y	L	G	P	L	N	G	P	E	L	L	V
Query Conservation																	.																																	.	.	.	.	.	.
Alig confidence																	.																																	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		D	P	A	T	V	F	R	L	V	A	A	E	A	L	T	L	T	G	A	D	G	T	L	V	A	V	P	A	D	A	A	E	E	L	V	I	V	E	V	A	G	A	V	P	A	E	V	E	A	S	A	I	P	V	Q	D	N	A	I	G	Q	A	F	R	D	R	A	P	R	R	L	D	V	.	.	.	.	.	.	.
Template Known Secondary structure			T																		S												S										T	S		G	G	G	T	T					S	S	S	S															S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		V	L	P	E	A	K	A	V	G	S	V	A	M	S	M	L	.	G	S	D	A	D	L	G	V	V	L	F	T	S	R	D	A	S	H	Y	Q	Q	G	Q	G	T	Q	L	L	H	E	I	A	L	M	L	P	E	L	L	E	R
Query Conservation																		.
Alig confidence		.																.
Template Conservation		.
Template Sequence		.	L	D	G	P	G	L	G	G	P	A	L	V	L	P	L	R	A	T	D	T	V	A	G	V	L	V	A	V	Q	G	S	G	A	R	P	F	T	A	E	Q	L	E	X	X	T	G	F	A	D	Q	A	A	V	A	W	Q	L
Template Known Secondary structure		.			T	T	S													T	T												T	T
Template Predicted Secondary structure		.
Template SS confidence
			309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions