Job Description P23305 Confidence 98.33% Date Thu Jan 5 11:39:21 GMT 2012 Rank 20 Aligned Residues 149 % Identity 11% Template c2oolA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the chromophore-binding domain of an unusual2 bacteriophytochrome rpbphp3 from r. palustris Resolution 2.20 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																				.															.	.	.	.	.	.	.	.
Query SS confidence																																				.															.	.	.	.	.	.	.	.
Query Sequence		N	E	G	L	F	Y	R	L	L	Y	L	Q	R	S	L	T	A	A	S	S	L	D	D	M	L	M	R	F	H	R	W	A	R	D	.	L	G	L	A	G	A	S	L	R	L	F	P	D	R	.	.	.	.	.	.	.	.	W	R	L	G	A	P	S	N	H	T	H	L	A	L	S	R	Q	S	F	E	P	L	R
Query Conservation																																				.															.	.	.	.	.	.	.	.
Alig confidence																																				.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	E	F	F	R	S	V	R	V	A	I	R	R	L	Q	T	A	A	D	L	P	T	A	C	W	I	A	A	S	E	V	R	R	I	T	G	F	D	R	I	K	V	Y	Q	F	A	A	D	W	S	G	Q	V	I	A	E	D	R	D	S	G	I	P	S	L	L	D	F	H	F	P	S	S	D	I	P	A	Q	S
Template Known Secondary structure																		T			S																			S									T	T	S											T	T					T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																													180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		I	Q	R	L	G	Q	E	Q	H	Y	L	G	P	L	N	G	P	E	L	L	V	V	L	P	E	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	G	S	V	A	M	S	M	L	.	G	S	D	A	D	L	G	V	V	L	F	T	S	R
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		R	A	L	Y	T	I	N	P	V	R	I	I	P	D	I	G	Y	R	P	S	P	L	V	P	D	I	N	P	R	L	G	G	P	I	D	L	S	F	S	V	L	R	S	V	S	P	T	H	L	E	Y	M	V	N	M	G	M	H	A	A	M	S	I	S	I	V	R	D	N	R	L	W	G	M	I	S	C	H	N	L
Template Known Secondary structure								S						S		T	T								S				T	T	T		S	S				T	T		T	T	B														T												T	T											S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	H	Y	Q	Q	G	Q	G	T	Q	L	L	H	E	I	A	L	M	L	P	E	L	L	E	R	W
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		T	P	R	F	V	S	Y	E	.	V	R	Q	A	C	E	L	I	A	Q	V	L	T	W	Q	I	G	V	L
Template Known Secondary structure		S								.
Template Predicted Secondary structure										.
Template SS confidence
		302	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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