Job Description P23305 Confidence 45.92% Date Thu Jan 5 11:39:21 GMT 2012 Rank 52 Aligned Residues 140 % Identity 14% Template c2avxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulatory protein sdia; PDBTitle: solution structure of e coli sdia1-171 Resolution UNK

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																											.	.	.	.															.	.	.	.	.	.
Query SS confidence																																											.	.	.	.															.	.	.	.	.	.
Query Sequence		Y	L	Q	R	S	L	T	A	A	S	S	L	D	D	M	L	M	R	F	H	R	W	A	R	D	L	G	L	A	G	A	S	L	R	L	F	P	D	R	W	R	.	.	.	.	L	G	A	P	S	N	H	T	H	L	A	L	S	R	.	.	.	.	.	.	Q	S	F	E	P	L	R	I	Q	R	L	G	Q	E	Q
Query Conservation																																											.	.	.	.															.	.	.	.	.	.
Alig confidence																																											.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	L	L	R	F	Q	R	M	E	T	A	E	E	V	Y	H	E	I	E	L	Q	A	Q	Q	L	E	Y	D	Y	Y	S	L	C	V	R	H	P	V	P	F	T	R	P	K	V	A	F	Y	T	N	Y	P	E	A	W	V	S	Y	Y	Q	A	K	N	F	L	A	I	D	P	V	L	N	P	E	N	F	S	Q	G
Template Known Secondary structure										T		S														T	T	T		S											T	T	S																					T	T	G	G	G	T		G	G	G		T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		161	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure						.	.													.														.																											.	.
Query SS confidence						.	.													.														.																											.	.
Query Sequence		H	Y	L	G	.	.	P	L	N	G	P	E	L	L	V	V	L	P	.	E	A	K	A	V	G	S	V	A	M	S	M	L	.	G	S	D	A	D	L	G	V	V	L	F	T	S	R	D	A	S	H	Y	Q	Q	G	Q	G	T	Q	.	.	L	L	H	E	I	A	L	M	L	P	E	L	L	E	R
Query Conservation						.	.													.														.																											.	.
Alig confidence						.	.													.														.																											.	.
Template Conservation
Template Sequence		H	L	M	W	N	D	D	L	F	S	E	A	Q	P	L	W	E	A	A	R	A	H	G	L	R	R	G	V	T	Q	Y	L	M	L	P	E	R	A	L	G	F	L	S	F	S	R	C	S	A	R	E	I	P	I	L	S	D	E	L	Q	L	K	M	Q	L	L	V	R	E	S	L	M	A	L	M	R
Template Known Secondary structure							T	T	T	T	S	S												T												T	T											S						S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions