Job Description P76491 Confidence 98.85% Date Thu Jan 5 12:23:33 GMT 2012 Rank 11 Aligned Residues 138 % Identity 17% Template d2pjqa1 SCOP info HD-domain/PDEase-like HD-domain/PDEase-like HD domain Resolution 2.80

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	S	L	Q	V	A	M	V	A	H	A	L	A	A	I	K	N	R	K	F	G	G	N	V	N	A	E	R	I	A	L	L	A	M	Y	H	D	A	S	E	V	L	T	G	D	L	P	T	P	V	K	Y	F	N	S	Q	I	A	Q	E	Y	K	A	I	E	K	I	A	Q	Q	K	L	V	D	M	V	P	E	E
Query Conservation
Alig confidence																			.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	L	Q	R	V	N	R	L	A	R	R	L	A	K	D	E	.	.	.	.	.	.	G	A	N	L	N	L	T	L	A	A	A	W	L	H	D	V	I	D	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	L	I	V	Q	L	N	A	Q	N	V	T	A	D
Template Known Secondary structure																			.	.	.	.	.	.	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	I	F	A	P	L	I	D	.	.	.	.	.	.	.	.	.	E	H	A	Y	S	D	E	E	K	S	L	V	K	Q	A	D	A	L	C	A	Y	.	.	.	.	.	L	K	C	L	E	E	L	A	A	G	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	T	A	I	F	A	I	I	D	H	X	S	F	S	K	S	F	N	G	P	Q	K	L	S	L	E	G	Q	V	V	Q	D	A	D	R	L	D	A	I	G	A	I	G	I	A	R	A	L	Y	Y	S	G	H	V	G	E	K	I	Y	D	P	A	I	A	P	R	E	H	X	T	R	E	Q	Y	R	H	Q	P	G
Template Known Secondary structure											T	S			T	G	G	G	G	G							S												T	T	S																T			S			T	T	S				S	S									S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
			155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	F	L	L	A	K	T	R	L	E	A	T	L	E	A	R	R	S	Q	E	M	D	Y	F	M	E	I	F	V	P	S	F	H	L	S	L	D	E	I	S	Q	D	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	A	I	N	H	F	Y	E	K	L	F	K	L	A	A	L	X	N	T	D	T	A	K	A	L	A	A	H	R	T	A	V	X	H	E	F	V	D	Q	F	K	A	E	W
Template Known Secondary structure			T	T						T	G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions