Return to main results Retrieve Phyre Job Id

Job DescriptionP76491
Confidence100.00%DateThu Jan 5 12:23:33 GMT 2012
Rank4Aligned Residues168
% Identity26%Templated1xx7a_
SCOP infoHD-domain/PDEase-like HD-domain/PDEase-like HD domain
Resolution2.26

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10........ .20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 





..























Query SS confidence 















. .





























































Query Sequence  QSHFFAHLSRLKLINR. . WPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPT
Query Conservation     

  
  

 
 
..
        






  

 

  

          

       

 


 
   


  
Alig confidence 















..
































.



























Template Conservation     

     

 
 
 

        






   



  

      .   

  
   


 


 
   



 
Template Sequence  SIDLILLAGKLKRIPRMGWLIKGVPNPESVADHSYRVAFITLLLAEELKKK. GVEIDVEKALKIAIIHDLGEAIITDLPL
Template Known Secondary structure 
TTTSB
T
SS

BT.T



TTTT



Template Predicted Secondary structure 






















.









Template SS confidence 















































































   1........10.........20.........30.........40.........50. ........60.........70.........
 
   81........90.........100.........110.........120 .........130.........140.........150.........
Predicted Secondary structure 










.









Query SS confidence 







































.






































Query Sequence  PVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLI. DEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLA
Query Conservation 
 
             
  
   
   



         .      
 

 


 

 
 
 


 

   

 

  
Alig confidence 







........













.....




.






































Template Conservation         
........   
   
  
  
.....   
  


   
 

  

  



  


 

   
     

Template Sequence  SAQKYLNK. . . . . . . . EEAEAKALKDVLPE. . . . . YTELFEEYSKALTLEGQLVKIADKLDMIIQAYEYELSGAKNLSEF
Template Known Secondary structure  TTS
........
GG.....G

STT

S
GGG
Template Predicted Secondary structure 



.............







Template SS confidence 















































































   80....... ..90.........100. ........110.........120.........130.........140......
 
   160.........170.........180........
Predicted Secondary structure 


Query SS confidence 




























Query Sequence  KTRLEATLEARRSQEMDYFMEIFVPSFHL
Query Conservation         
     


  
    
     
Alig confidence 






....

















Template Conservation         ....          


 

  
Template Sequence  WNALEDL. . . . EKLEISRYLREIIEEVRR
Template Known Secondary structure  GG....TTSGGGGG
Template Predicted Secondary structure  ....


Template SS confidence 




























   147..150... ......160.........170.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions