Return to main results Retrieve Phyre Job Id

Job DescriptionP76491
Confidence96.80%DateThu Jan 5 12:23:33 GMT 2012
Rank23Aligned Residues106
% Identity17%Templatec3nqwB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cg11900; PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20..... ....30.........40.........50.........60.........70.........80.........90........
Predicted Secondary structure 





.

























Query SS confidence 





.








































































Query Sequence  PLMRNV. RTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEK
Query Conservation        .  






  

 

  

          

       

 


 
   


  
 
             
 
Alig confidence 





.


















........






.

















........











Template Conservation   
 

  

 

  
   

 

   ........    
 
. 
 










  
 ........
 
   

  

Template Sequence  QQRRKDPQETPYVNHVINVSTILSVE. . . . . . . . ACITDEG. VLMAALLHDVVEDTDASF. . . . . . . . EDVEKLFGPDVC
Template Known Secondary structure  T
B
SSSS

BT........S



.TTTSS

........
Template Predicted Secondary structure 










........




.




........
Template SS confidence 















































































   22.......30.........40....... ..50.... .....60.........70.. .......80....
 
   99100.........110.........120.........130.........140..
Predicted Secondary structure 







Query SS confidence 











































Query Sequence  IAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAY
Query Conservation   
   
   



               
 

 


 

 
 
 
Alig confidence 











































Template Conservation   

  


        
     
 

  
 

 







 

Template Sequence  GLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNL
Template Known Secondary structure  T


TTS
STTTS
Template Predicted Secondary structure 







Template SS confidence 











































   85....90.........100.........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions