Job Description P76491 Confidence 95.67% Date Thu Jan 5 12:23:33 GMT 2012 Rank 31 Aligned Residues 123 % Identity 15% Template c3ljvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m Resolution 2.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	H	L	S	R	L	K	L	I	N	R	W	P	L	M	R	N	V	R	T	E	N	V	S	E	H	S	L	Q	V	A	M	V	A	H	A	L	A	A	I	K	N	R	K	F	G	G	N	V	N	A	E	R	I	A	L	L	A	M	Y	H	D	A	S	E	V	L	T	G	D	L	P	T	P	V	K	Y	F	N
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.																													.	.
Template Conservation																																									.	.	.	.	.	.	.																													.	.
Template Sequence		F	A	L	S	L	S	L	I	D	A	H	R	E	G	R	C	E	A	F	D	Y	A	A	Y	W	Q	K	S	L	A	R	A	V	A	L	Q	S	I	T	.	.	.	.	.	.	.	A	Q	A	V	A	P	K	E	A	F	T	L	G	L	L	A	D	V	G	R	L	A	L	A	T	A	W	P	.	.	E	E	Y	S
Template Known Secondary structure				T	T					T	S	S		T	T			T	T	S																		T	T	G	.	.	.	.	.	.	.	G	G														T	T												.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																													.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	I	A	Q	E	Y	K	A	I	E	K	I	A	Q	Q	K	L	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	P	E	E	L	R	D	I	F	A	P	L	I	D	E	H	A	Y	S	D	E	E	K	S	L	V	K	Q	A	D	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	C	L	R	K	A	D	G	E	A	L	I	A	L	E	R	E	R	F	A	T	D	H	D	E	L	T	R	X	L	L	T	D	W	G	F	P	Q	V	F	I	D	A	L	Q	L	S	Q	Q	T	G	R	F	A	R	Q	L	A	L	A	Q	H	I	A	D	H
Template Known Secondary structure			T	T	S	S			T												S	S													T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions