Job Description P76491 Confidence 97.29% Date Thu Jan 5 12:23:33 GMT 2012 Rank 21 Aligned Residues 106 % Identity 23% Template c3hc1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized hdod domain protein; PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution Resolution 1.90 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.													.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	S	L	Q	V	A	M	V	A	H	A	L	A	A	I	K	N	R	K	F	G	G	N	V	N	A	E	R	I	A	L	L	A	M	Y	H	D	A	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	L	T	G	D	L	P	T	P	V	K	Y	F	N	S	Q	I	A	Q	E	Y	K	A	I	E	K	I
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		A	H	S	L	G	V	A	R	I	A	K	L	I	A	E	R	T	G	.	.	.	.	.	F	L	N	P	V	N	V	Y	V	A	G	L	L	H	D	V	G	E	V	F	I	N	F	F	R	G	K	E	F	S	Q	V	V	T	L	V	D	E	E	K	I	T	F	G	Q	A	E	E	R	L	F	G	T	S	H	C	E
Template Known Secondary structure																		T	T	.	.	.	.	.		S											T	T	T										S																											S	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure										.	.																.	.	.
Query SS confidence										.	.																.	.	.
Query Sequence		A	Q	Q	K	L	V	D	M	.	.	V	P	E	E	L	R	D	I	F	A	P	L	I	D	E	.	.	.	H	A	Y	S	D	E	E	K	S	L	V	K	Q	A	D	A	L	C	A	Y
Query Conservation										.	.																.	.	.
Alig confidence										.	.																.	.	.
Template Conservation
Template Sequence		V	G	F	A	L	A	K	R	W	S	L	N	E	F	I	C	D	T	I	L	Y	H	H	D	I	E	A	V	P	Y	K	Q	A	A	I	V	A	X	V	A	F	A	D	E	Y	C	T	L
Template Known Secondary structure										T	T												T	T		G	G	G		S	S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions