Job Description P75783 Confidence 35.47% Date Thu Jan 5 12:14:05 GMT 2012 Rank 96 Aligned Residues 30 % Identity 17% Template d2pxrc1 SCOP info Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Resolution 1.50

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		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	V	K	K	H	F	D	L	A	G	V	R	A	P	V	Q	T	Y	Q	V	L	P	A	P	G	A	T	P	A	E	P	L	P	P	G	E	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		Q	M	L	K	E	T	I	N	E	E	A	A	E	.	.	.	.	.	.	.	.	W	D	R	L	H	P	V	H	A	G	P	I	A	P	G	Q	M
Template Known Secondary structure															.	.	.	.	.	.	.	.					S				S	S		S	S	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions