Return to main results Retrieve Phyre Job Id

Job DescriptionP75783
Confidence23.80%DateThu Jan 5 12:14:05 GMT 2012
Rank226Aligned Residues35
% Identity20%Templated2nn6h1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   575....580.........590.........600.........610....
Predicted Secondary structure 












Query SS confidence 







































Query Sequence  NTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSI
Query Conservation   


 
 
 
  
 
  
 



 

  

   




 
Alig confidence 






.....



























Template Conservation   




 .....
 
  
   
  


     
 
 

  
Template Sequence  EVGDIVV. . . . . GRITEVQQKRWKVETNSRLDSVLLLSSM
Template Known Secondary structure 
SSB


.....TT
SSSS
SS

Template Predicted Secondary structure 



.....






Template SS confidence 







































   7980..... ....90.........100.........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions