 |
Job Description | P75783 | Confidence | 27.34% | Date | Thu Jan 5 12:14:05 GMT 2012 |
Rank | 142 | Aligned Residues | 29 |
% Identity | 38% | Template | c3izcU_ |
PDB info |
PDB header:ribosome | Chain: U: PDB Molecule:60s ribosomal protein rpl21 (l21e); |
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
|
Resolution | NULL Å |
|
  |   |
572 | . | . | . | . | . | . | . | 580 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | M | N | T | G | D | L | V | T | I | G | P | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | T | V | E | R | M | S | I | R | S | V | G | V | R |
Query Conservation |   |
|   |   |   |
|
|
|   |
|   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |
|   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|   |
|   |
|
|   |
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |
Template Sequence |   |
K | V | Y | K | V | G | D | I | V | D | I | K | A | N | G | S | I | Q | K | G | M | P | H | K | F | Y | Q | G | K | T | G | V | V | Y | N | V | T | K | S | S | V | G | V | I |
Template Known Secondary structure |   |
|
|
|
| T | T |
|  |  |  |  |
|
|
| T | T |
|
| S | S |
|
|
| G | G | G | T | T |
|  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|