Phyre 2 alignment of P75783 with c3i5dC

Job Description P75783
Confidence 23.21% Date Thu Jan 5 12:14:05 GMT 2012

Rank 260 Aligned Residues 65

% Identity 26% Template c3i5dC_

PDB info PDB header:transport protein Chain: C: PDB Molecule:p2x purinoceptor; PDBTitle: crystal structure of the atp-gated p2x4 ion channel in the closed, apo2 state at 3.5 angstroms (r3)

Resolution 3.46 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.				.	.	600	.	.	.	.	.	.	.	.	.	610				.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure																																												.	.	.														.	.	.
Query SS confidence																																												.	.	.														.	.	.
Query Sequence	S	Q	T	L	V	K	D	I	I	T	G	V	F	I	Q	F	E	N	G	M	N	T	G	D	L	V	T	I	G	P	L	T	G	T	V	E	R	M	S	I	R	S	V	.	.	.	G	V	R	Q	D	T	G	A	Y	H	I	I	P	.	.	.	W	S	S	I	T	T	F	A	N	F
Query Conservation																																												.	.	.														.	.	.
Alig confidence																										.																		.	.	.														.	.	.
Template Conservation																										.
Template Sequence	T	Q	A	L	V	I	A	Y	V	I	G	Y	V	C	V	Y	N	K	G	Y	Q	D	T	D	T	.	V	L	S	S	V	T	T	K	V	K	G	I	A	L	T	N	T	S	E	L	G	E	R	I	W	D	V	A	D	Y	I	I	P	P	Q	E	D	G	S	F	F	V	L	T	N	M
Template Known Secondary structure										T	T	T	T	T	T	T	S		T	T	B					.																		T	T	T							T	T	T	T	S		S	S			S	S
Template Predicted Secondary structure																										.
Template SS confidence
	38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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