Job Description P75783 Confidence 45.06% Date Thu Jan 5 12:14:05 GMT 2012 Rank 55 Aligned Residues 64 % Identity 16% Template c3ftoA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:oligopeptide-binding protein oppa; PDBTitle: crystal structure of oppa in a open conformation Resolution 2.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	E	D	A	D	K	A	N	Q	A	L	K	D	A	V	A	E	L	M	E	N	E	E	I	R	G	L	I	I	G	E	P	N	F	A	G	I	V	G	L	S	N	T	A	F	T	L	R	V	S	F	T	T	L	P	L	K	Q	W	T	V	R	F	A	L	D	S	Q	V	K	K	H	F	D	L	A	G	V	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		E	K	Q	D	L	D	K	A	N	K	L	L	D	E	D	G	W	K	L	N	K	S	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	K	D	G	K	E	L	S	L	V	Y	A	A	R	V	G	D	A	.	.	N	A	E	T	I	A	Q	N	Y	I	Q	Q	W	K	K	I	G	V	K
Template Known Secondary structure		S	S												T	T	T					S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T										B	S		S	T	.	.	T															T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.																.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		715
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		440

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions