Job Description P75783 Confidence 23.70% Date Thu Jan 5 12:14:05 GMT 2012 Rank 236 Aligned Residues 33 % Identity 15% Template c2wlvA_ PDB info PDB header:virus protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal capsid domain of hiv-2 Resolution 1.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	L	D	S	Q	V	K	K	H	F	D	L	A	G	V	R	A	P	V	Q	T	Y	Q	V	L	P	A	P	G	A	T	P	A	E	P	L	P	P	G	E	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.					.
Template Conservation																			.	.	.	.	.	.	.	.					.
Template Sequence		Q	A	A	M	Q	I	I	R	E	I	I	N	E	E	A	A	E	.	.	.	.	.	.	.	.	W	D	V	Q	.	H	P	I	P	G	P	L	P	A	G	Q	L
Template Known Secondary structure																			.	.	.	.	.	.	.	.				T	.									T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.					.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.									.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions