Job Description P75783 Confidence 21.19% Date Thu Jan 5 12:14:05 GMT 2012 Rank 361 Aligned Residues 62 % Identity 11% Template c2qpqC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protein bug27; PDBTitle: structure of bug27 from bordetella pertussis Resolution 1.92 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	A	N	Q	A	L	K	D	A	V	A	E	L	M	E	N	E	E	I	R	G	L	I	I	G	E	P	N	F	A	G	I	V	G	L	S	N	T	A	F	T	L	R	V	S	F	T	T	L	P	L	K	Q	W	T	V	R	F	A	L	D	S	Q	V	K	K	H	F	D	L	A	G	V	R	A
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		P	M	A	V	R	Q	K	L	Y	D	G	I	A	K	V	M	Q	R	D	D	V	Q	K	K	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Y	S	T	.	A	S	D	G	P	E	V	F	Q	K	M	V	E	T	D	I	D	R	F	S	A	L	T	K	Q	I	G	L	K	V
Template Known Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.		T				.																											T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.															.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions