 |
| Job Description | P30178 | | Confidence | 17.87% | Date | Thu Jan 5 11:46:15 GMT 2012 |
| Rank | 60 | Aligned Residues | 24 |
| % Identity | 29% | Template | c2p7vA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:regulator of sigma d; |
PDBTitle: crystal structure of the escherichia coli regulator of sigma 70, rsd,2 in complex with sigma 70 domain 4
|
| Resolution | 2.60 Å |
|
| | |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | |
|
|
350 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | |
|
|
| | . | . | . | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | A | I | C | D | A | A | R | Q | I | G | M | P | E | . |
. |
. |
E | T | L | Q | A | F | C | Q | Q | L |
| Query Conservation | |
| |
| | |
|
| | | |
|
| | | . | . | . | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| |
|
| |
|
|
|
| |
| | | | | |
|
| |
|
|
| |
|
| Template Sequence | |
H | L | L | V | A | Y | Y | N | L | V | G | I | K | P | G | N | E | K | A | L | D | D | F | C | Q | S | L |
| Template Known Secondary structure | |
| | | | | | | | | | S |
|
|
|
|
|
| | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
|
|
|
|
| | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
