Return to main results Retrieve Phyre Job Id

Job DescriptionP30178
Confidence31.26%DateThu Jan 5 11:46:15 GMT 2012
Rank16Aligned Residues37
% Identity19%Templatec2kebA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna polymerase subunit alpha b; PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   316...320.........330.........340.........350..
Predicted Secondary structure 








Query SS confidence 




































Query Sequence  EVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETL
Query Conservation 
          

 
       
  

   

     
Alig confidence 




































Template Conservation   
 
 


  


   
 



  


  
 


   
Template Sequence  AQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGM
Template Known Secondary structure  T
B

T

Template Predicted Secondary structure 









Template SS confidence 




































   5....10.........20.........30.........40.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions