Job Description P30178 Confidence 100.00% Date Thu Jan 5 11:46:15 GMT 2012 Rank 1 Aligned Residues 357 % Identity 97% Template c2g8yB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate/l-lactate dehydrogenases; PDBTitle: the structure of a putative malate/lactate dehydrogenase from e. coli. Resolution 2.15 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	F	D	A	Q	T	L	H	S	F	I	Q	A	V	F	R	Q	M	G	S	E	E	Q	E	A	K	L	V	A	D	H	L	I	A	A	N	L	A	G	H	D	S	H	G	I	G	M	I	P	S	Y	V	R	S	W	S	Q	G	H	L	Q	I	N	H	H	A	K	T	V	K	E	A	G	A	A	V	T	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	F	D	A	Q	T	L	H	S	F	I	Q	A	V	F	R	Q	X	G	S	E	E	Q	E	A	K	L	V	A	D	H	L	I	A	A	N	L	A	G	H	D	S	H	G	I	G	X	F	P	S	Y	V	R	S	W	S	Q	G	H	L	Q	I	N	H	H	A	K	T	V	K	E	A	G	A	A	V	T	L	D
Template Known Secondary structure																					T																			T	T		G	G	G	T	G	G	G										T	T		S	B	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	A	F	G	Q	V	A	A	H	E	A	M	A	L	G	I	E	K	A	H	Q	H	G	I	A	A	V	A	L	H	N	S	H	H	I	G	R	I	G	Y	W	A	E	Q	C	A	A	A	G	F	V	S	I	H	F	V	S	V	V	G	I	P	M	V	A	P	F	H	G	R	D	S	R	F	G	T	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	R	A	F	G	Q	V	A	A	H	E	A	X	A	L	G	I	E	K	A	H	Q	H	G	I	A	A	V	A	L	H	N	S	H	H	I	G	R	I	G	Y	W	A	E	Q	C	A	A	A	G	F	V	S	I	H	F	V	S	V	V	G	I	P	X	V	A	P	F	H	G	R	D	S	R	F	G	T	N	P
Template Known Secondary structure			T	T	B																					S																									T	T										T	T				B			T	T		S	S			B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	V	V	F	P	R	K	D	N	F	P	L	L	L	D	Y	A	T	S	A	I	A	F	G	K	T	R	V	A	W	H	K	G	V	P	V	P	P	G	C	L	I	D	V	N	G	V	P	T	T	N	P	A	V	M	Q	E	S	P	L	G	S	L	L	T	F	A	E	H	K	G	Y	A	L	A	A	M	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	C	V	V	F	P	R	K	D	N	F	P	L	L	L	D	Y	A	T	S	A	I	A	F	G	K	T	R	V	A	W	H	K	G	V	P	V	P	P	G	C	L	I	D	V	N	G	V	P	T	T	N	P	A	V	X	Q	E	S	P	L	G	S	L	L	T	F	A	E	H	K	G	Y	A	L	A	A	X	C	E
Template Known Secondary structure									T	T	S									S	B	S	S											T	T					T	T	S				T	T	S						T					S	S	S						B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	G	A	L	S	G	G	K	T	T	H	Q	E	T	L	Q	T	S	P	D	A	I	L	N	C	M	T	T	I	I	I	N	P	E	L	F	G	A	P	D	C	N	A	Q	T	E	A	F	A	E	W	V	K	A	S	P	H	D	D	D	K	P	I	L	L	P	G	E	W	E	V	N	T	R	R	E	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	G	G	A	L	S	G	G	K	T	T	H	Q	E	T	L	Q	T	S	P	D	A	I	L	N	C	X	T	T	I	I	I	N	P	E	L	F	G	A	P	D	C	N	A	Q	T	E	A	F	A	E	W	V	K	A	S	P	H	D	D	D	K	P	I	L	L	P	G	E	W	E	V	N	T	R	R	E	R	Q
Template Known Secondary structure				T	T	T	T	T	T					S	G	G	G			S	S	T	T													G	G	G	S			T	T														T	S				T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	G	I	P	L	D	A	G	S	W	Q	A	I	C	D	A	A	R	Q	I	G	M	P	E	E	T	L	Q	A	F	C	Q	Q	L	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	G	I	P	L	D	A	G	S	W	Q	A	I	C	D	A	A	R	Q	I	G	X	P	E	E	T	L	Q	A	F	C	Q	Q	L	A	S
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions