Job Description P30178 Confidence 100.00% Date Thu Jan 5 11:46:15 GMT 2012 Rank 4 Aligned Residues 335 % Identity 31% Template c1vbiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:type 2 malate/lactate dehydrogenase; PDBTitle: crystal structure of type 2 malate/lactate dehydrogenase from thermus2 thermophilus hb8 Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	D	A	Q	T	L	H	S	F	I	Q	A	V	F	R	Q	M	G	S	E	E	Q	E	A	K	L	V	A	D	H	L	I	A	A	N	L	A	G	H	D	S	H	G	I	G	M	I	P	S	Y	V	R	S	W	S	Q	G	H	L	Q	I	N	H	H	A	K	T	V	K	E	A	G	A	A	V	T	L	D	G
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		R	W	R	A	D	F	L	S	A	W	A	E	A	L	L	R	K	A	G	A	D	E	P	S	A	K	A	V	A	W	A	L	V	E	A	D	L	R	G	V	G	S	H	G	L	L	R	L	P	V	Y	V	R	R	L	E	A	G	L	V	N	P	S	P	T	L	P	L	.	E	E	R	G	P	V	A	L	L	D	G
Template Known Secondary structure																			T	T																			T	T		G	G	G	S	G	G	G										T	T		S	B	S	S						.				T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	F	G	Q	V	A	A	H	E	A	M	A	L	G	I	E	K	A	H	Q	H	G	I	A	A	V	A	L	H	N	S	H	H	I	G	R	I	G	Y	W	A	E	Q	C	A	A	A	G	F	V	S	I	H	F	V	S	V	V	G	I	P	M	V	A	P	F	H	G	R	D	S	R	F	G	T	N	P	F
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		E	H	G	F	G	P	R	V	A	L	K	A	V	E	A	A	Q	S	L	A	R	R	H	G	L	G	A	V	G	V	R	R	S	T	H	F	G	M	A	G	L	Y	A	E	K	L	A	R	E	G	F	V	A	W	V	T	T	N	.	.	A	E	P	D	V	V	P	F	G	G	R	E	K	A	L	G	T	N	P	L
Template Known Secondary structure		T	T	B																					S																									T	T									.	.		S			B			T	T		S	S			B
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	V	F	P	R	K	D	N	F	P	L	L	L	D	Y	A	T	S	A	I	A	F	G	K	T	R	V	A	W	H	K	G	V	P	V	P	P	G	C	L	I	D	V	N	G	V	P	T	T	N	P	A	V	M	Q	E	S	P	L	G	S	L	L	T	F	A	E	H	K	G	Y	A	L	A	A	M	C	E	I
Query Conservation
Alig confidence											.																																																.	.	.	.	.
Template Conservation											.																																																.	.	.	.	.
Template Sequence		A	F	A	A	P	A	P	Q	G	.	I	L	V	A	D	L	A	T	S	E	S	A	M	G	K	V	F	L	A	R	E	K	G	E	R	I	P	P	S	W	G	V	D	R	E	G	S	P	T	D	D	P	H	R	V	Y	A	.	.	.	.	.	L	R	P	L	G	G	P	K	G	Y	A	L	A	L	L	V	E	V
Template Known Secondary structure								T	T		.								S	B	S	S												T					T	T	S				T	T	S		B		S		G	G	G				.	.	.	.	.			B	T	T	T
Template Predicted Secondary structure											.																																																.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																					.	.																							.																.
Query SS confidence																					.	.																							.																.
Query Sequence		L	G	G	A	L	S	G	G	K	T	T	H	Q	E	T	L	Q	T	S	.	.	P	D	A	I	L	N	C	M	T	T	I	I	I	N	P	E	L	F	G	A	P	D	.	C	N	A	Q	T	E	A	F	A	E	W	V	K	A	S	.	P	H	D	D	D	K	P	I	L	L	P	G	E	W	E	V	N	T	R	R
Query Conservation																					.	.																							.																.
Alig confidence																					.	.																							.																.
Template Conservation
Template Sequence		L	S	G	V	L	T	G	A	G	V	A	H	G	I	G	R	M	Y	D	E	W	D	R	P	Q	D	V	G	H	F	L	L	A	L	D	P	G	R	F	V	G	K	E	A	F	L	E	R	M	G	A	L	W	Q	A	L	K	A	T	P	P	A	P	G	H	E	E	V	F	L	P	G	E	L	E	A	R	R	R	E
Template Known Secondary structure				T	T	T	T	T	S			G	G	G	S			T	T	T			S	S													G	G	G	T	T																		T	S				T	T		S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Q	K	Q	G	I	P	L	D	A	G	S	W	Q	A	I	C	D	A	A	R	Q	I	G	M	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	L	A	E	G	M	A	L	P	E	R	V	V	A	E	L	K	A	L	G	E	R	Y	G	V	P	W
Template Known Secondary structure																										T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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