Return to main results Retrieve Phyre Job Id

Job DescriptionP16384
Confidence97.95%DateThu Jan 5 11:35:04 GMT 2012
Rank43Aligned Residues162
% Identity12%Templated2vp4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  SDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSA
Query Conservation            

 
 







 


 

    







 



 








  
   






   
 
  

Alig confidence 


















































.............















Template Conservation         

 

 
 
  







  
   
                  .............                
Template Sequence  TKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNG. . . . . . . . . . . . . VNLLELMYKDPKKWAM
Template Known Secondary structure 

BTTT



STTS
TTGGGTTT

TT
BTT.............B
S
Template Predicted Secondary structure 





























.............








Template SS confidence 















































































   12.......20.........30.........40.........50.........60.. .......70........
 
   82.......90.........100.........110... ......120.........130........ .140...
Predicted Secondary structure 





.....









.............

Query SS confidence 































. . . . .
























. . . . . . . . . . . . .




Query Sequence  ADFRRDALAEMADITAAGRIPLLVGGTMLYFK. . . . . ALLEGLSPLPSADPEVRARIEQQAA. . . . . . . . . . . . . EQGWE
Query Conservation    
   
   
  
  


 







 

 .....


 
    
      
  
     .............  
  
Alig confidence 































.....
























.............




Template Conservation                                                                       
  
 
    
Template Sequence  PFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPE
Template Known Secondary structure 



SSS
TTSS
B



S

Template Predicted Secondary structure 























Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   144.....150.........160.........170......
Predicted Secondary structure 






Query SS confidence 
































Query Sequence  SLHRQLQEVDPVAAARIHPNDPQRLSRALEVFF
Query Conservation   
   
   

  
  
  

  

 




  
Alig confidence 
































Template Conservation      
   
    
       
  
   
    
Template Sequence  VAYERIRQRARSEESCVPLKYLQELHELHEDWL
Template Known Secondary structure 

GGGTT

Template Predicted Secondary structure 





Template SS confidence 
































   159160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions