Job Description P16384 Confidence 97.76% Date Thu Jan 5 11:35:04 GMT 2012 Rank 57 Aligned Residues 166 % Identity 13% Template c3u5zM_ PDB info PDB header:dna binding protein/dna Chain: M: PDB Molecule:dna polymerase accessory protein 44; PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog Resolution 3.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	S	L	P	K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	P	V	E	L	I	S	V	D	S	A	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I	R	D	P	S	Q	A	Y	S	A	A	D	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	K	I	P	H	I	I	L	H	S	P	S	P	G	T	G	K	T	T	V	A	K	A	L	C	H	D	V	N	A	D	M	M	F	V	N	G	S	D	C	K	I	D	F	V	R	G	P	L	T	N	F	A	S	A	A	S	F	D	G	R	Q	K	V	I	V	I	D	E	F	D	R	S	G	L	A	E	S	Q
Template Known Secondary structure			S	S									S	S	S		S	S												T	T								G	G	G								T								S			T	T										S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		R	D	A	L	A	E	M	A	D	I	T	A	A	G	R	I	P	L	L	V	G	G	T	M	L	Y	.	.	.	.	.	F	K	A	L	L	E	G	L	S	P	L	P	S	A	D	P	E	V	R	A	R	I	E	Q	Q	A	A	E	Q	G	W	E	S	L	H	R	Q	L	Q	E	V	D	P	V	A	A	A	R	I
Query Conservation																												.	.	.	.	.
Alig confidence											.	.																.	.	.	.	.
Template Conservation											.	.
Template Sequence		R	H	L	R	S	F	M	E	A	.	.	Y	S	S	N	C	S	I	I	I	T	A	N	N	I	D	G	I	I	K	P	L	Q	S	R	C	R	V	I	T	F	G	Q	P	T	D	E	D	K	I	E	M	M	K	Q	M	I	R	R	L	T	E	I	C	K	H	E	G	I	A	I	A	D	M	K	V	V	A	A	L
Template Known Secondary structure											.	.	T	T	T	T								S		G	G	G	S								S					T	T																										T				S		S
Template Predicted Secondary structure											.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
					161	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	H	P	N	D	P	Q	R	L	S	R	A	L	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	K	K	N	F	P	D	F	R	K	T	I	G	E	L	D
Template Known Secondary structure					T		S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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