|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | P | K | A | I | F | L | M | G | P | T | A | S | G | K | T | A | L | A | I | E | L | R | K | I | L | P | V | E | L | I | S | V | D | S | A | L | I | Y | K | G | M | D | I | G | T | A | K | P | N | A | E | E | L | L | A | A | P | H | R | L | L | D | I | R | D | P | S | Q | A | Y | S | A | A | D | F | R | R | D |
Query Conservation |   |
  |   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
Template Sequence |   |
N | K | A | N | L | F | I | I | S | A | P | S | G | A | G | K | T | S | L | V | R | A | L | V | K | A | L | A | E | I | K | I | S | I | S | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | T | R | P | K | R | P | G | D | Q | E | G | V | D | Y | F | F | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | T | R | F | Q | A | X |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . |  |
| S |
|
|
| T | T |
|
| B | T | T | T | B |  |  |
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . |
  |
  |   |
88 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | E | M | A | D | I | T | A | A | G | R | I | P | L | L | V | G | G | T | M | L | Y | F | K | A | L | L | E | G | L | S | P | . |
. |
. |
. |
. |
L | P | S | A | D | P | E | V | R | A | R | I |
Query Conservation |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |   | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |
|
|
Template Sequence |   |
V | K | E | G | A | F | L | E | H | A | T | I | Y | E | R | H | Y | G | T | E | K | D | W | V | L | R | Q | L | K | A | G | R | D | V | L | L | E | I | D | W | Q | G | A | R | Q | I | R | E | L | F | P | P | A | L | S | I | F | I | L | P | P | S | I | E | A | L | R | E | R | L |
Template Known Secondary structure |   |
 |  |  | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |