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Job DescriptionP16384
Confidence100.00%DateThu Jan 5 11:35:04 GMT 2012
Rank2Aligned Residues299
% Identity34%Templatec3d3qB_
PDB info PDB header:transferaseChain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDAL
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Template Sequence  PFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSXQVYQGXDIGTAKVTTEEXEGIPHYXIDILPPDASFSAYEFKKRAE
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STTSSTT

SSTTBTT

TTTT


TTTTTT

SSS
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TTS


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Query Sequence  AEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLS
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Template Sequence  KYIKDITRRGKVPIIAGGTGLYIQSLLYNYA. FEDKXKQVKLKL. KELEHLNNNKLHEYLASFDKESAKDIHPNNRKRVL
Template Known Secondary structure  TT



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Query Sequence  RALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCV
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Template Sequence  RAIEYYLKTKKLLSSRKKVQQFTENYDTLLIGI. EXSRETLYLRINKRVDIXLGHGLFNEVQHLVEQG. . FEASQSXQAI
Template Known Secondary structure  SS
B
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TTT..
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Query Sequence  GYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSE. . KPEQARDEVLQVVGA
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Template Sequence  GYKELVPVIKGNISXENAVEKLKQHSRQYAKRQLTWFKNKXNVHWLNKERXSLQXXLDEITTQINK
Template Known Secondary structure  TTTTTSS
T


TTT

TT
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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