Job Description P16384 Confidence 100.00% Date Thu Jan 5 11:35:04 GMT 2012 Rank 6 Aligned Residues 238 % Identity 31% Template c3a8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenylate isopentenyltransferase; PDBTitle: plant adenylate isopentenyltransferase in complex with atp Resolution 2.37 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		P	K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	P	V	E	L	I	S	V	D	S	A	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I	R	D	P	S	Q	A	.	Y	S	A	A	D	F	R	R	D	A
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		E	K	L	L	V	L	M	G	A	T	G	T	G	K	S	R	L	S	I	D	L	A	A	H	F	P	L	E	V	I	N	S	D	K	M	Q	V	Y	K	G	L	D	I	T	T	N	K	I	S	V	P	D	R	G	G	V	P	H	H	L	L	G	E	V	D	P	A	R	G	E	L	T	P	A	D	F	R	S	L	A
Template Known Secondary structure										S	T	T	S	S										T	T	S									S	S	T	T	B	S	S		T	T	T	T	T				S	G	G	G	T	T					S	S	S		B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	M	A	D	I	T	A	A	G	R	I	P	L	L	V	G	G	T	M	L	Y	F	K	A	L	L	E	G	L	S	P	L	P	S	A	D	P	E	V	R	A	R	I	E	Q	Q	A	A	E	Q	G	W	E	S	L	H	R	Q	L	Q	E	V	D	P	V	A	A	A	R	I	H	P	N	D	P	Q	R	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	V	S	E	I	T	G	R	R	K	L	P	V	L	V	G	G	S	N	S	F	I	H	A	L	L	V	D	R	F	D	S	S	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T																		B	S	S			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		S	R	A	L	E	V	F	F	I	S	G	K	T	L	T	E	L	T	Q	T	S	G	D	A	L	P	Y	Q	V	H	Q	F	A	I	A	P	A	S	R	E	L	L	H	Q	R	I	E	Q	R	F	H	Q	M	L	A	S	G	F	E	A	E	V	R	A	L	F	A	R	G	D	L	H	T	.	.	.	.	.	.	D
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																							.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	R	Y	D	C	C	F	L	W	V	.	D	V	S	V	K	V	L	T	D	Y	L	A	K	R	V	D	D	M	L	E	L	G	M	F	D	E	L	A	E	F	Y	S	P	E	D	E	D	H	D	E	D	S	A	T	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	S	S								.																						T											T	T		S		T	T	S		G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
																									160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.											.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.											.
Query Sequence		L	P	S	I	R	C	V	G	Y	R	Q	M	W	S	Y	L	E	G	E	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	E	M	V	Y	R	G	V	C	A	T	R	Q	L	A	K	R	Q	I	T	W	L	R	G	W	E	.	.	.	.	G	V	H	W	L	D	S	E	K	P	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.											.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.											.
Template Conservation
Template Sequence		T	G	L	R	K	A	I	G	V	P	E	F	D	R	Y	F	E	K	F	R	P	G	D	V	E	G	E	D	P	G	R	D	R	V	R	R	G	A	F	E	E	A	V	R	A	I	K	E	N	T	C	H	L	A	K	R	Q	I	G	K	I	L	R	L	K	G	A	G	W	D	L	R	R	L	D	A	T	E	S	F
Template Known Secondary structure			G	G	G	G	S	T	T											S		T	T					S			T	T																																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
																			301	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	R	D	E	V	L	Q	V	V	G	A	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	A	M	T	S	D	S	G	E	K	C	T	E	I	W	E	K	Q	V	L	E	P	S	V	K	I	V	S	R	F
Template Known Secondary structure						S	T	T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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