Job Description P16384 Confidence 92.89% Date Thu Jan 5 11:35:04 GMT 2012 Rank 354 Aligned Residues 58 % Identity 12% Template c2q3fB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ras-related gtp-binding protein d; PDBTitle: x-ray crystal structure of putative human ras-related gtp2 binding d in complex with gmppnp Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	P	V	E	L	I	S	V	D	S	A	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I
Query Conservation
Alig confidence																											.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		V	K	P	R	I	L	L	X	G	L	R	R	S	G	K	S	S	I	Q	K	V	V	F	H	K	.	.	.	.	.	.	X	S	P	N	E	T	L	F	L	E	S	T	N	K	I	C	R	E	D	V	S	N	S	S	F	V	N	F	Q	I	W	D	F
Template Known Secondary structure											S	T	T	S	S										S		.	.	.	.	.	.			G	G	G	G	G	G						S									S	S
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions