Job Description P16384 Confidence 97.02% Date Thu Jan 5 11:35:04 GMT 2012 Rank 156 Aligned Residues 84 % Identity 21% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		P	K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	.	.	.	.	.	P	V	E	L	I	S	V	D	S	A	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I	R	D	P	S	Q	A	Y	S	A	A	D	F
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		G	N	V	I	M	F	V	G	L	Q	G	S	G	K	T	T	T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	D	.	.	.	.	.	.	.	.	.	.	.	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	.	I	P	F	Y	G	S	Y	T	E	M	D	P
Template Known Secondary structure		S								S	T	T	S	S															T	T										.	.	.	.	.	.	.	.	.	.	.		S	S	S														T	.										S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	D	A	L	A	E	M	A	D	I	T	A	A	G	R	I	P	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	I	I	V
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions